CDS

Accession Number TCMCG023C02224
gbkey CDS
Protein Id PIN24992.1
Location join(6609..6892,7313..7517,7610..7817,8539..8894,9299..9725,9897..9977,10070..10260,10346..10536,10658..10706)
Organism Handroanthus impetiginosus
locus_tag CDL12_02254

Protein

Length 663aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA324125, BioSample:SAMN05195323
db_source NKXS01000325.1
Definition Nuclear AAA ATPase (VCP subfamily) [Handroanthus impetiginosus]
Locus_tag CDL12_02254

EGGNOG-MAPPER Annotation

COG_category O
Description Holliday junction DNA helicase ruvB N-terminus
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14575        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03008        [VIEW IN KEGG]
map03008        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005516        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009534        [VIEW IN EMBL-EBI]
GO:0009535        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009579        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0031976        [VIEW IN EMBL-EBI]
GO:0031984        [VIEW IN EMBL-EBI]
GO:0034357        [VIEW IN EMBL-EBI]
GO:0042651        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044436        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0055035        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAATAGTAAGAATTATGATTTATCTTCTCGAGATCCAAATACAGGAAAAGACATAGTGCACGCTTTTGTTCTTAATTTGGGAACAAAAATTCATTTTCTTTTACCGGGTAATCCTATGGTTGAAACTTCACAGAACAATTCTTTGGCACATCCAAAACTTGGGGCTGGGCATATCAAAGATAGTGTAAGAGTCAACTTTCCAAAGTTGGGAGGCCTCTCTAAAGACTTTGCAGTTTTAAAGGATATTATAGTTTCATCAGCTGCGCAAGTTACACTTGCAAGCTTGGGTTTACGGCCTACAAAGGGGGTGCTTCTTCATGGGCCACCGGGAACAGGAAAGACTGCTTTGGCTCGGGTCTGTGCTCATGATGCTGGTGTTACCATGTTTCCAGTGAATGGACCTGAAATTATTGATCAATACCATGGAAAAACTGAAGAAGCATTGCATGAGGTGTTCAACGAAGCCAGCAAGGCTTCACCTGCTGTGGTTTTCATAGATGAGTTGGACGCTATTGCACCTGCACGTAAGGAGGGAGGAGATGACCTATCTCACAGAGTAGTTGCCACTCTCTTGAATTTGATGGATGGTATTAGTAGAACTAATGGGGTGCTAATTATTGCAGCAACAAACCGTCCTGATAGCATAGACCCTGCACTTAGACGGCCAGGAAGGCTTGATAAAGAAATTGAGATAGGTGTTCCATCTCCTGGACAACGCCATGAAATATTGCTTTCGCTTCTTAGTGAAATGAATCACTCACTGTCGGACAAGGATATTGAGAATCTTGCAATGGCCACACATGGTTTTGTTGGTGCTGACTTAGCTACTCTCTGCAAGCAGGCAGCCTTGGTCCGTCTTCGGCAATATGTTAAATCCATTACAAACCAGGGTGAGGTTGCTTTGTCCTGCACATCTGAAACAGAAAACTCATCAGACGCTACGGATGGAATTGTAATAAACAAGACTTGTGACCTAGAGGACACCTTAAAAATTACGTCAGAAGACTTTGAGAAGGCCAGAGTTAGAGTAAGGCCAAGTGCCATGAGAGAGATAAATCTTGAAGTTCCTAAAGTTGGCTGGGAGGATGTTGGTGGTCAGATGGAGGTTAAGATGCAATTGATGGAAGCTGTGCAATGGCCTCAAAAGCACAAGGATTCTTTCGAGCGCATTGGAACTCGTCCCCCCAGAGGAATATTGTTGTTTGGTCCTCCAGGATGCAGCAAAACTCTTTTAGCTCGTGCAGTAGCTTCTGAAGCAGGTTTGAATTTTCTTGCAGTTAAGGGCCCTGAGCTTTTCAGCAAATGGGTTGGTGAATCTGAAAAAGCCGTACGTTCTTTGTTCACAAAGGCTAGGGCAAATGCTCCTTCAATTATATTTGTTGATGAAATTGATGGTCTTGCTGCAATCCGTGGACAAGAAAGTGATGGGATTTCAGTTGGTGATCGGGTTATAAGTCAGCTACTTGTTGAATTGGATGGTTTGCAACAAAGAGGTAGTGTCACTGTTGTTGCTGCTACAAATCGGCCAGATAATATCGATCCTGCTCTTCTCAGGCCTGGACGTTTTGACCGACTGATATATGTGGGACCACCAAACAGAAAAGATCGTGAAGAAATATTTCATGTCCATTTGCGATGGAAGCCATGTAGTTCTGACGTATGCATCAGTGAGCTCGCTCTTCTTACTGAAGGCTGTACGGGTGCTGATATATATCATATCTGTCGTGAAGCATCCATGAAAGCTGTGGAAGAGAACTTCTCTGCCTCAGAAATGACAATGGAGCACTTAAAATTTGGAATTAAGCAAGTAGAGCCATCTGATGTTCGGATGTATGAGACGCTGTCGGCAAAGTTCCAAAGAATTGTTCATTCGACCGCCAAGGAAGAAGATGATTTGAGACGTGGCCCATGTTCAGATAAACCAAGTCACATAAGTTTTTGGACCAGATTAAGATCGGCTTTGCTCTTTCTTTTTCGGCTCCAGGGTTGA
Protein:  
MNSKNYDLSSRDPNTGKDIVHAFVLNLGTKIHFLLPGNPMVETSQNNSLAHPKLGAGHIKDSVRVNFPKLGGLSKDFAVLKDIIVSSAAQVTLASLGLRPTKGVLLHGPPGTGKTALARVCAHDAGVTMFPVNGPEIIDQYHGKTEEALHEVFNEASKASPAVVFIDELDAIAPARKEGGDDLSHRVVATLLNLMDGISRTNGVLIIAATNRPDSIDPALRRPGRLDKEIEIGVPSPGQRHEILLSLLSEMNHSLSDKDIENLAMATHGFVGADLATLCKQAALVRLRQYVKSITNQGEVALSCTSETENSSDATDGIVINKTCDLEDTLKITSEDFEKARVRVRPSAMREINLEVPKVGWEDVGGQMEVKMQLMEAVQWPQKHKDSFERIGTRPPRGILLFGPPGCSKTLLARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFTKARANAPSIIFVDEIDGLAAIRGQESDGISVGDRVISQLLVELDGLQQRGSVTVVAATNRPDNIDPALLRPGRFDRLIYVGPPNRKDREEIFHVHLRWKPCSSDVCISELALLTEGCTGADIYHICREASMKAVEENFSASEMTMEHLKFGIKQVEPSDVRMYETLSAKFQRIVHSTAKEEDDLRRGPCSDKPSHISFWTRLRSALLFLFRLQG